Neel Dey

Neel Dey

Postdoctoral Researcher in Medical Machine Learning

Publications

Intraoperative 2D/3D Image Registration via Differentiable X-ray Rendering
V. Gopalakrishnan, N. Dey, P. Golland
In CVPR: Computer Vision and Pattern Recognition, 2024

preprint webpage source code

AnyStar: Domain randomized universal star-convex 3D instance segmentation
N. Dey, S. M. Abulnaga, B. Billot, E. A. Turk, P. E. Grant, A. V. Dalca, P. Golland
In WACV, 2024

preprint webpage source code

SE(3)-Equivariant and Noise-Invariant 3D Motion Tracking in Medical Images
B. Billot, D. Moyer, N. Dey, M. Hoffmann, E. A. Turk, B. Gagoski, P. E. Grant, P. Golland
In arXiv eess.IV and cs.CV, 2023

preprint source code

Dynamic Neural Fields for Learning Atlases of 4D Fetal MRI Time-series
Z. Chix, Z. Congx, C. J. Wang, Y. Liu, E. A. Turk, P. E. Grant, S. M. Abulnaga, P. Golland, N. Dey (x - joint-first authors).
In Medical Imaging meets NeurIPS workshop, 2023

paper preprint source code

Boundary-weighted logit consistency improves calibration of segmentation networks
N. Karani, N. Dey, P. Golland
In MICCAI, 2023

paper preprint source code

E(3) × SO(3)-Equivariant Networks for Spherical Deconvolution in Diffusion MRI
A. Elaldi, G. Gerig, N. Dey
In Medical Imaging with Deep Learning (MIDL), 2023

paper preprint video source code

Learning Probabilistic Piecewise Rigid Atlases of Model Organisms via Generative Deep Networks
A. Nejatbakhsh, N. Dey, V. Venkatachalam, E. Yemini, L. Paninski, E. Varol
In Information Processing in Medical Imaging (IPMI), 2023

paper preprint source code

Data Consistent Deep Rigid MRI Motion Correction
N. M. Singh, N. Dey, M. Hoffmann, B. Fischl, E. Adalsteinsson, R. Frost, A. V. Dalca, P. Golland
In Medical Imaging with Deep Learning (MIDL), 2023

paper preprint video source code

Local Spatiotemporal Representation Learning for Longitudinally-consistent Neuroimage Analysis
M. Ren, N. Dey, M.A. Styner, K. Botteron, G. Gerig
In NeurIPS, 2022

paper preprint webpage source code

Dual-domain self-supervised learning for accelerated non-Cartesian MRI reconstruction
B. Zhou, J. Schlemper, N. Dey, S. S. M. Salehi, K. Sheth, C. Liu, J. S. Duncan, M. Sofka
In Medical Image Analysis, 2022

paper

ContraReg: Contrastive Learning of Multi-modality Unsupervised Deformable Image Registration
N. Dey, J. Schlemper, S.S.M. Salehi, B. Zhou, G. Gerig, M. Sofka
In MICCAI, 2022

paper preprint video

DSFormer: A dual-domain self-supervised transformer for accelerated multi-contrast mri reconstruction
B. Zhou, N. Dey, J. Schlemper, S.S.M. Salehi, C. Liu, J.S. Duncan, M. Sofka
In WACV, 2022

paper preprint

Generative Adversarial Registration for Improved Conditional Deformable Templates
N. Dey, M. Ren, A. Dalca, G. Gerig.
In International Conference on Computer Vision (ICCV), 2021

preprint webpage video source code

Q-space Conditioned Translation Networks for Directional Synthesis of Diffusion Weighted Images from Multi-modal Structural MRI
M. Renx, H. Kimx, N. Dey, G. Gerig (x - joint-first authors).
In International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2021

preprint webpage source code

Equivariant Spherical Deconvolution: Learning Sparse Orientation Distribution Functions from Spherical Data
A. Elaldix, N. Deyx, H. Kim, G. Gerig (x - joint-first authors).
In Information Processing in Medical Imaging (IPMI), 2021

paper preprint video source code

Group Equivariant Generative Adversarial Networks
N. Dey, A. Chen, S. Ghafurian
In International Conference on Learning Representations (ICLR), 2021

paper preprint video source code

Segmentation-Renormalized Deep Feature Modulation for Unpaired Image Harmonization
M.Renx, N. Deyx, J. Fishbaugh, G. Gerig (x - joint-first authors).
In IEEE Transactions on Medical Imaging (TMI), 2021

paper preprint source code

Point-supervised Segmentation of Microscopy Images and Volumes via Objectness Regularization
S. Li, N. Dey, K. Bermond, L. von der Emde, C. A. Curcio, T. Ach, G. Gerig
In International Symposium on Biomedical Imaging (ISBI), 2021

preprint source code

Self-supervised Denoising via Diffeomorphic Template Estimation: Application to Optical Coherence Tomography
G. Gisbert, N. Dey, H. Ishikawa, J. Schuman, J. Fishbaugh, G. Gerig
In MICCAI Ophthalmic Medical Image Analysis (OMIA), 2020

paper preprint

Robust non-negative tensor factorization, diffeomorphic motion correction, and functional statistics to understand fixation in fluorescence microscopy
N. Dey, J. Messinger, R.T. Smith, C.A. Curcio, G. Gerig
In International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2019

paper preprint source code

Tensor decomposition of hyperspectral images to study autofluorescence in age-related macular degeneration
N. Dey, S. Hong, T. Ach, Y. Koutalos, C.A. Curcio, R.T. Smith, G. Gerig
In Medical Image Analysis, 2019

paper preprint

Multi-modal image fusion for multispectral super-resolution in microscopy
N. Dey, S. Li, K. Bermond, R. Heintzmann, C.A. Curcio, G. Gerig
In SPIE Medical Imaging, 2019

paper preprint